CDS
| Accession Number | TCMCG007C38846 |
| gbkey | CDS |
| Protein Id | XP_009150876.1 |
| Location | complement(join(21309093..21309159,21309245..21309313,21309404..21309520,21309657..21309769,21309861..21309935,21310050..21310184,21310353..21310477,21310557..21310616,21310692..21311189,21311265..21311598,21311676..21311819,21311983..21312057,21312141..21312211,21312357..21312459,21312602..21312828,21312911..21313028,21313176..21313306,21313573..21313603)) |
| Gene | LOC103874218 |
| GeneID | 103874218 |
| Organism | Brassica rapa |
Protein
| Length | 830aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009152628.3 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGACTTCTACCAAGCGAGCCTACAAGCTACAGGAATTTGTGGCGCATTCTGCTGCTGTTAACTGTCTCAAGATCGGAAGGAAGTCATCTAGGGTTCTGGTTACTGGTGGGGAAGATCATAAAGTCAATCTCTGGGCTATTGGTAAGCCCAACGCCATTCTGAGCTTGTATGGGCACTCGAGCGGAATTGATTCAGTGACATTTGATGCTTCGGAGGTCTTAGTTGCAGCAGGAGCTGCTAGTGGTACCATCAAACTTTGGGATCTGGAGGAGGCAAAACTTGTCAGGACTCTCACTGGCCACAGGTCAAATTGCATATCGGTGGATTTTCACCCTTTTGGTGAGTTCTTTGCGTCTGGCTCACTAGACACGAACCTTAAGATATGGGATCTACGGAAAAAGGGTCCCATCCATACTTACAAGGGTCACACTCGGGGAGTCAATGTACTCAGATTCACCCCGGATGGTCGCTGGGTTGTATCTGGAGGAGAGGACAACATCGTGAAGGTTTGGGATTTAACAGCTGGAAAGTTATTGACCGAGTTCAAGTGTCATGAAGGACAGATTCAAAGCCTAGATTTTCATCCTCATGAATTTCTTCTGGCAACAGGTTCAGCTGATAGGACTGTAAAATTCTGGGATCTTGAAACATTCGAGCTAATTGGTTCTGGTGGACCTGAGACGTCTGGCGTCCGTTGCCTGAGCTTTAATCCAGATGGGAAGACGGTGCTTTGTGGATTGCAAGAAAGCCTGAAGATTTTCTCGTGGGAGCCAATTAGGTGTCATGATGGAGTGGATGTTGGATGGTCAAGATTGTCAGATATGAATGTTCATGAGGGAAAGCTTCTTGGTTGCTCATACAATCAAAATTGTGTAGGCGTTTGGGTTGTAGATCTCTCGCGCACTGAGCCGTGCAATACTGGAGATGCTGCTCAGTCAAATGGACAAGCAGAGAAAAAGTCTGGCTCAGGAAGAGATTCAGTAGTTCTCAATGACAATAACTCAAAGACTACTATTCCAGGCAAGCTGTCTGTTTCCCAGAACGTAGATCCTTTACTGAAGGAAACAAAGTCTCTCGGAAGATTATCTGTTACACAGAACTCTGATCCTTCGACAAAAGAAACAAAGGCCGTTGGAAGGTCGTCAACATCCCACAGTTCGGATTCAAAGCCTCTCGGAAGGTTGTCAGTTTCTCAAAATTCAGACGTTGCTAAAGAGTCCAGGACGTTATCATCTACGGGAAGTGTACCTAGCACTCCTCATAGGGTCAGTGTAACCAGTGTTTCAAAAGCCGCCGTCTCTAATGCTGCAACGTCAAGGAGGAATTTCACAAAAGCTAACCAAAAGTCGCATCCTGTTAATAAGGCTGCAGATTTTATTCAGGTGTTTGTCCCCAGAGAAGACCCTAGAGTAGAGCAGGCGACTGAATCCAGGGCAGAACTTGACATTATTGCAAGAACAATGCCTTATTCGTTGCAGGCTGCTGATTCTAGAAGGTCGCCTCCTAGCAGCAAAAATAACCAAGATCTGCCAAACGCTCCGGTTCTTGAAATGTCAGAGTCTCAGCCAGTTGAACCAAGTAACATACCGGATAAAAGTACATTTCCCGGTGGCAAGGGTGGCATGCGGGGTGCAGCTGAGCGAAGCATCAACGATTTTAGATACAAGAGATATGGCAGGAGTAATTCAAGGTCACGGATGGGATCGCCTCCAAGAAACCACGATGAAAACTATGACCTGGTAAGCCACAAATCAAGTAGAGAACCAAGTCCAACTGAAAGTCGAAAAGGAGGAAGATTCCAGTCACTCTTCATAAATAGGGAGAGAAGAGGAAGATTTTCCAACTACGAGGGTCCTGTTTCTAATTTTCCGGGTGGAGGAAATGCGGCGGCTCCTAACATCCACCCTTCAAATATGTTCAAGCAGAGAGGAAACAATATGCCAGTTGAACAAGGGATCGAGTCTCCTTCTGAAGATAATATTGTTGAAGACATAATGGGGAAACACGATCAATTTGTCAGCTCTATGCAGTCTCGTTTGGCTAAGTTACAGGTAGTTCGTAGATACTGGGAAAGAAATGATGTTAAGAACACGATAGGTTCGATGGAGAAGATGGCTGATAATGCTGTTACCGCGGATGTGCTGAGTATAATAACCGAGAGAAATGAGATTATGACACTGGATACTTGTACCTCCCTTCTTCCCATTCTGGCAGCTCTTCTAGCAAGTGACATGGATCAGCATTTGAGCGTTTCCTTGGATATGCTGCTTAAGCTGGTTAGAATGTACGGGTCACCAATTTACTTATCACTGTCCGCTCCAGCATCTGTTGGTGTAGATATCGAAGCCGAGCAAAGGATCGAGCGCTACAGCCGTTGCTTTGTGGAGCTAGAGAAAGTTAAAGCCTGCCTTCCCTCGCTGTCAAGAAGAGGAGGTTTGGTGGCCAAGTCTGTGCTTGAACTCAACTTGGCATTTCAGGAAATTTCATCATAA |
| Protein: MTSTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKLVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDLRKKGPIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKCHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETSGVRCLSFNPDGKTVLCGLQESLKIFSWEPIRCHDGVDVGWSRLSDMNVHEGKLLGCSYNQNCVGVWVVDLSRTEPCNTGDAAQSNGQAEKKSGSGRDSVVLNDNNSKTTIPGKLSVSQNVDPLLKETKSLGRLSVTQNSDPSTKETKAVGRSSTSHSSDSKPLGRLSVSQNSDVAKESRTLSSTGSVPSTPHRVSVTSVSKAAVSNAATSRRNFTKANQKSHPVNKAADFIQVFVPREDPRVEQATESRAELDIIARTMPYSLQAADSRRSPPSSKNNQDLPNAPVLEMSESQPVEPSNIPDKSTFPGGKGGMRGAAERSINDFRYKRYGRSNSRSRMGSPPRNHDENYDLVSHKSSREPSPTESRKGGRFQSLFINRERRGRFSNYEGPVSNFPGGGNAAAPNIHPSNMFKQRGNNMPVEQGIESPSEDNIVEDIMGKHDQFVSSMQSRLAKLQVVRRYWERNDVKNTIGSMEKMADNAVTADVLSIITERNEIMTLDTCTSLLPILAALLASDMDQHLSVSLDMLLKLVRMYGSPIYLSLSAPASVGVDIEAEQRIERYSRCFVELEKVKACLPSLSRRGGLVAKSVLELNLAFQEISS |